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fbxa-64 F-box domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 189026, updated on 2-Nov-2024

Summary

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Official Symbol
fbxa-64
Official Full Name
F-box domain-containing protein
Primary source
WormBase:WBGene00020883
Locus tag
CELE_T28A11.21
See related
AllianceGenome:WB:WBGene00020883
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in body wall musculature; ventral nerve cord; and vulval muscle. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See fbxa-64 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (3276956..3278151, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DUF19 domain-containing protein Neighboring gene DUF19 domain-containing protein Neighboring gene DUF19 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The embryonic muscle transcriptome of Caenorhabditis elegans. Fox RM, et al. Genome Biol, 2007. PMID 17848203, Free PMC Article
  2. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
  3. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
F-box domain-containing protein
NP_503905.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3276956..3278151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071504.4 → NP_503905.2  F-box domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503905.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    P91522
    Conserved Domains (2) summary
    smart00256
    Location:22 → 62
    FBOX; A Receptor for Ubiquitination Targets
    pfam01827
    Location:134 → 277
    FTH; FTH domain
Nucleotide Protein
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