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Y2H9A.4 Transmembrane protein [ Caenorhabditis elegans ]

Gene ID: 189352, updated on 4-Jan-2025

Summary

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Official Symbol
Y2H9A.4
Official Full Name
Transmembrane protein
Primary source
WormBase:WBGene00012381
Locus tag
CELE_Y2H9A.4
See related
AllianceGenome:WB:WBGene00012381
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Y2H9A.4 in Genome Data Viewer
Location:
chromosome: V
Exon count:
12
Sequence:
Chromosome: V; NC_003283.11 (13445899..13448815)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Transmembrane protein Neighboring gene pseudo Neighboring gene UPAR/Ly6 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transmembrane protein
NP_001256504.1
  • Confirmed by transcript evidence
NP_001256505.1
  • Confirmed by transcript evidence
NP_001256506.1
  • Confirmed by transcript evidence
NP_001300000.1
  • Partially confirmed by transcript evidence
NP_001300001.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    13445899..13448815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269575.3 → NP_001256504.1  Transmembrane protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256504.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H8ESD3
    Conserved Domains (2) summary
    pfam05218
    Location:432 → 611
    DUF713; Protein of unknown function (DUF713)
    pfam13476
    Location:280 → 433
    AAA_23; AAA domain

  2. NM_001269576.1 → NP_001256505.1  Transmembrane protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256505.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EFR4
    Conserved Domains (2) summary
    pfam05218
    Location:407 → 586
    DUF713; Protein of unknown function (DUF713)
    pfam13476
    Location:255 → 408
    AAA_23; AAA domain

  3. NM_001269577.1 → NP_001256506.1  Transmembrane protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256506.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H8ESD2
    Conserved Domains (2) summary
    pfam05218
    Location:404 → 583
    DUF713; Protein of unknown function (DUF713)
    pfam13476
    Location:252 → 405
    AAA_23; AAA domain

  4. NM_001313072.1 → NP_001300001.1  Transmembrane protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AUJ3
    Conserved Domains (2) summary
    pfam05218
    Location:407 → 586
    DUF713; Protein of unknown function (DUF713)
    pfam13476
    Location:255 → 408
    AAA_23; AAA domain

  5. NM_001313071.1 → NP_001300000.1  Transmembrane protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AS51
    Conserved Domains (2) summary
    pfam05218
    Location:404 → 583
    DUF713; Protein of unknown function (DUF713)
    pfam13476
    Location:252 → 405
    AAA_23; AAA domain
Nucleotide Protein
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