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sre-18 Serpentine Receptor, class E (Epsilon) [ Caenorhabditis elegans ]

Gene ID: 189745, updated on 4-Jan-2025

Summary

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Official Symbol
sre-18
Official Full Name
Serpentine Receptor, class E (Epsilon)
Primary source
WormBase:WBGene00012705
Locus tag
CELE_Y39C12A.3
See related
AllianceGenome:WB:WBGene00012705
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is expressed in intestine and nervous system. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See sre-18 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
8
Sequence:
Chromosome: IV; NC_003282.8 (12227717..12229779, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene SAM domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class E (Epsilon)
NP_001293900.1
  • Confirmed by transcript evidence
NP_001294130.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    12227717..12229779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001307201.4 → NP_001294130.1  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294130.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A067XG43
    Conserved Domains (1) summary
    pfam03125
    Location:16 → 315
    Sre; C. elegans Sre G protein-coupled chemoreceptor

  2. NM_001306971.3 → NP_001293900.1  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293900.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A061AIZ9
    Conserved Domains (1) summary
    pfam03125
    Location:1 → 95
    Sre; C. elegans Sre G protein-coupled chemoreceptor

RNA

  1. NR_131614.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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