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pstk-1 Phosphoryl Seryl-TRNA (Ser/Sec) Kinase [ Caenorhabditis elegans ]

Gene ID: 190070, updated on 4-Jan-2025

Summary

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Official Symbol
pstk-1
Official Full Name
Phosphoryl Seryl-TRNA (Ser/Sec) Kinase
Primary source
WormBase:WBGene00013041
Locus tag
CELE_Y49E10.22
See related
AllianceGenome:WB:WBGene00013041
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable kinase activity and tRNA binding activity. Orthologous to human PSTK (phosphoseryl-tRNA kinase). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See pstk-1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003281.10 (12466610..12468293)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Sensory neuron membrane protein 2 Neighboring gene Conserved oligomeric Golgi complex subunit 7;RAD50-interacting protein 1 Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CARD domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables tRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Phosphoryl Seryl-TRNA (Ser/Sec) Kinase
NP_499627.1
  • Product from WormBase gene class pstk;
    Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    12466610..12468293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067226.2 → NP_499627.1  Phosphoryl Seryl-TRNA (Ser/Sec) Kinase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499627.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XTU1
    Conserved Domains (2) summary
    pfam13671
    Location:3 → 135
    AAA_33; AAA domain
    cl17190
    Location:3 → 228
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
Nucleotide Protein
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