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Bathy07g04740 hypothetical protein [ Bathycoccus prasinos ]

Gene ID: 19014963, updated on 16-Nov-2023

Summary

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Gene symbol
Bathy07g04740
Gene description
hypothetical protein
Locus tag
Bathy07g04740
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Bathycoccus prasinos (strain: RCC 1105)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
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Genomic context

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See Bathy07g04740 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_024002.1 (927721..930690)

Chromosome 7 - NC_024002.1Genomic Context describing neighboring genes Neighboring gene ferredoxin-thioredoxin reductase catalytic chain Neighboring gene hypothetical protein Neighboring gene prasinophyte specific chlorophyll a/b-binding protein, chloroplast precursor Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024002.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024002.1 Reference assembly

    Range
    927721..930690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007511912.1 → XP_007511974.1  predicted protein [Bathycoccus prasinos]

    See identical proteins and their annotated locations for XP_007511974.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8F1X1
    Conserved Domains (3) summary
    PLN02361
    Location:539 → 978
    PLN02361; alpha-amylase
    cd11314
    Location:543 → 901
    AmyAc_arch_bac_plant_AmyA; Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    pfam07821
    Location:892 → 978
    Alpha-amyl_C2; Alpha-amylase C-terminal beta-sheet domain
Nucleotide Protein
Heading Accession and Version

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