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Bathy07g04840 hypothetical protein [ Bathycoccus prasinos ]

Gene ID: 19014973, updated on 16-Nov-2023

Summary

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Gene symbol
Bathy07g04840
Gene description
hypothetical protein
Locus tag
Bathy07g04840
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Bathycoccus prasinos (strain: RCC 1105)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
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Genomic context

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See Bathy07g04840 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_024002.1 (943421..943852, complement)

Chromosome 7 - NC_024002.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L23 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024002.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in clathrin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-2 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024002.1 Reference assembly

    Range
    943421..943852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007511804.1 → XP_007511866.1  predicted protein [Bathycoccus prasinos]

    See identical proteins and their annotated locations for XP_007511866.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8FHL5
    Conserved Domains (1) summary
    COG5030
    Location:1 → 139
    APS2; Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]
Nucleotide Protein
Heading Accession and Version

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