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sri-19 Serpentine Receptor, class H [ Caenorhabditis elegans ]

Gene ID: 190552, updated on 4-Jan-2025

Summary

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Official Symbol
sri-19
Official Full Name
Serpentine Receptor, class H
Primary source
WormBase:WBGene00005531
Locus tag
CELE_Y69E1A.6
See related
AllianceGenome:WB:WBGene00005531
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in body wall musculature; head neurons; and vulval muscle. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See sri-19 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
9
Sequence:
Chromosome: IV; NC_003282.8 (10958372..10961208)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Phosphatidylethanolamine-binding protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Aquaporin-3 Neighboring gene ncRNA Neighboring gene Protein FAR1-RELATED SEQUENCE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The embryonic muscle transcriptome of Caenorhabditis elegans. Fox RM, et al. Genome Biol, 2007. PMID 17848203, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class H
NP_001263783.1
  • Partially confirmed by transcript evidence
NP_502043.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10958372..10961208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001276854.1 → NP_001263783.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263783.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    J7S134
    Conserved Domains (1) summary
    cl11665
    Location:6 → 259
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  2. NM_069642.1 → NP_502043.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502043.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XW32
    Conserved Domains (1) summary
    pfam10327
    Location:8 → 310
    7TM_GPCR_Sri; Serpentine type 7TM GPCR chemoreceptor Sri

RNA

  1. NR_131607.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
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