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ZK622.4 LIM zinc-binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 191367, updated on 4-Jan-2025

Summary

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Official Symbol
ZK622.4
Official Full Name
LIM zinc-binding domain-containing protein
Primary source
WormBase:WBGene00022782
Locus tag
CELE_ZK622.4
See related
AllianceGenome:WB:WBGene00022782
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See ZK622.4 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (5292702..5293306)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tRNA-Ala Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Glu Neighboring gene Tyrosine-protein kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
LIM zinc-binding domain-containing protein
NP_494993.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    5292702..5293306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062592.5 → NP_494993.2  LIM zinc-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494993.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95PW6
    Conserved Domains (1) summary
    cd09443
    Location:5 → 64
    LIM_Ltd-1; The LIM domain of LIM and transglutaminase domains protein (Ltd-1)
Nucleotide Protein
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