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grd-9 Ground-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 191663, updated on 4-Jan-2025

Summary

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Official Symbol
grd-9
Official Full Name
Ground-like domain-containing protein
Primary source
WormBase:WBGene00001698
Locus tag
CELE_C04E6.6
See related
AllianceGenome:WB:WBGene00001698
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Acts upstream of or within nematode male tail mating organ morphogenesis. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See grd-9 in Genome Data Viewer
Location:
chromosome: V
Exon count:
9
Sequence:
Chromosome: V; NC_003283.11 (5895321..5898602)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene HAD family phosphatase Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ubiquitinyl hydrolase 1 Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Warthog and groundhog, novel families related to hedgehog. Bürglin TR. Curr Biol, 1996 Sep 1. PMID 8805384
  2. Metabolic plasticity sustains the robustness of Caenorhabditis elegans embryogenesis. Chen S, et al. EMBO Rep, 2023 Dec 6. PMID 37885348, Free PMC Article
  3. Caenorhabditis elegans has scores of hedgehog-related genes: sequence and expression analysis. Aspöck G, et al. Genome Res, 1999 Oct. PMID 10523520
  4. Comprehensive analysis of gene expression patterns of hedgehog-related genes. Hao L, et al. BMC Genomics, 2006 Oct 31. PMID 17076889, Free PMC Article
  5. The function and expansion of the Patched- and Hedgehog-related homologs in C. elegans. Zugasti O, et al. Genome Res, 2005 Oct. PMID 16204193, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
acts_upstream_of_or_within nematode male tail mating organ morphogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
Ground-like domain-containing protein
NP_504535.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    5895321..5898602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072134.6 → NP_504535.2  Ground-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504535.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O01465
    Conserved Domains (1) summary
    pfam04155
    Location:479 → 561
    Ground-like; Ground-like domain
Nucleotide Protein
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