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Phf21a PHD finger protein 21A [ Mus musculus (house mouse) ]

Gene ID: 192285, updated on 27-Nov-2024

Summary

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Official Symbol
Phf21aprovided by MGI
Official Full Name
PHD finger protein 21Aprovided by MGI
Primary source
MGI:MGI:2384756
See related
Ensembl:ENSMUSG00000058318 AllianceGenome:MGI:2384756
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Bhc; 80kDa; Bhc80; PFTF1; BHC80a; mBHC80; D030065N23Rik
Summary
Enables chromatin binding activity. Acts upstream of or within suckling behavior. Predicted to be part of DNA repair complex and histone deacetylase complex. Is expressed in several structures, including central nervous system; cranium; early conceptus; genitourinary system; and hemolymphoid system. Orthologous to human PHF21A (PHD finger protein 21A). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in limb E14.5 (RPKM 6.7), ovary adult (RPKM 5.9) and 28 other tissues See more
Orthologs
human all
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Genomic context

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See Phf21a in Genome Data Viewer
Location:
2 E1; 2 50.8 cM
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (92014096..92195011)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (92183751..92364667)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 31473 Neighboring gene STARR-seq mESC enhancer starr_05133 Neighboring gene predicted gene, 39877 Neighboring gene STARR-positive B cell enhancer ABC_E9520 Neighboring gene STARR-seq mESC enhancer starr_05137 Neighboring gene microRNA 1955 Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene STARR-seq mESC enhancer starr_05138 Neighboring gene STARR-positive B cell enhancer ABC_E1247 Neighboring gene STARR-positive B cell enhancer ABC_E4480 Neighboring gene LARGE xylosyl- and glucuronyltransferase 2 Neighboring gene peroxisomal biogenesis factor 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A component of BRAF-HDAC complex, BHC80, is required for neonatal survival in mice. Iwase S, et al. FEBS Lett, 2006 May 29. PMID 16684532
  2. LSD1 regulates pluripotency of embryonic stem/carcinoma cells through histone deacetylase 1-mediated deacetylation of histone H4 at lysine 16. Yin F, et al. Mol Cell Biol, 2014 Jan. PMID 24190971, Free PMC Article
  3. Translocations disrupting PHF21A in the Potocki-Shaffer-syndrome region are associated with intellectual disability and craniofacial anomalies. Kim HG, et al. Am J Hum Genet, 2012 Jul 13. PMID 22770980, Free PMC Article
  4. Characterization of BHC80 in BRAF-HDAC complex, involved in neuron-specific gene repression. Iwase S, et al. Biochem Biophys Res Commun, 2004 Sep 17. PMID 15325272
  5. A SMAD1/5-YAP signalling module drives radial glia self-amplification and growth of the developing cerebral cortex. Najas S, et al. Development, 2020 Jul 13. PMID 32541003

See all (41) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Presumably serves as a scaffold protein in BHC in neuronal as well as non-neuronal cells. Possible role in spermatogenesis.
    Title: Characterization of BHC80 in BRAF-HDAC complex, involved in neuron-specific gene repression.
  2. Bhc80 is indispensable for the survival of neonatal pups.
    Title: A component of BRAF-HDAC complex, BHC80, is required for neonatal survival in mice.
Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC29190, MGC123676

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables chromatin binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables chromatin binding ISO
Inferred from Sequence Orthology
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within suckling behavior IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA repair complex ISO
Inferred from Sequence Orthology
more info
 PubMed 
part_of histone deacetylase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of histone deacetylase complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
PHD finger protein 21A
Names
BRAF35-HDAC complex protein BHC80
BRAF35/HDAC2 complex
Braf35/HDAC complex (Bhc)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109690.2 → NP_001103160.1  PHD finger protein 21A isoform 2

    See identical proteins and their annotated locations for NP_001103160.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) encodes the longest isoform (2).
    Source sequence(s)
    AL731709
    Consensus CDS
    CCDS50644.1
    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Related
    ENSMUSP00000088074.6, ENSMUST00000090586.12
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  2. NM_001109691.1 → NP_001103161.1  PHD finger protein 21A isoform 3

    See identical proteins and their annotated locations for NP_001103161.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3), as well as variant 9, encodes isoform 3.
    Source sequence(s)
    AK037174, AL731709, BQ031869
    Consensus CDS
    CCDS50645.1
    UniProtKB/TrEMBL
    D3Z764, F6URE6
    Related
    ENSMUSP00000106922.3, ENSMUST00000111291.9
    Conserved Domains (1) summary
    cd15523
    Location:415 → 457
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  3. NM_001346704.1 → NP_001333633.1  PHD finger protein 21A isoform 4

    Status: VALIDATED

    Source sequence(s)
    AL691462, AL731709
    Consensus CDS
    CCDS84556.1
    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A2AHG4
    Related
    ENSMUSP00000106925.2, ENSMUST00000111294.8

  4. NM_001362829.1 → NP_001349758.1  PHD finger protein 21A isoform 5

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5), as well as variant 6, encodes isoform 5.
    Source sequence(s)
    AL691462, AL731709
    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  5. NM_001362830.1 → NP_001349759.1  PHD finger protein 21A isoform 5

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6), as well as variant 5, encodes isoform 5.
    Source sequence(s)
    AL691462, AL731709
    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  6. NM_001362831.1 → NP_001349760.1  PHD finger protein 21A isoform 6

    Status: VALIDATED

    Source sequence(s)
    AL691462, AL731709
    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (2) summary
    cd15523
    Location:459 → 501
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
    cl26267
    Location:349 → 505
    ING; Inhibitor of growth proteins N-terminal histone-binding

  7. NM_001362832.1 → NP_001349761.1  PHD finger protein 21A isoform 7

    Status: VALIDATED

    Source sequence(s)
    AL691462, AL731709
    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (2) summary
    COG5034
    Location:341 → 497
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:451 → 493
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  8. NM_001362833.1 → NP_001349762.1  PHD finger protein 21A isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9), as well as variant 3, encodes isoform 3.
    Source sequence(s)
    AL691462, AL731709
    Consensus CDS
    CCDS50645.1
    UniProtKB/TrEMBL
    D3Z764, F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:415 → 457
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  9. NM_138755.2 → NP_620094.2  PHD finger protein 21A isoform 1

    Status: VALIDATED

    Source sequence(s)
    AB105178, AK037174, AL731709, BQ031869, CX217243
    Consensus CDS
    CCDS16442.1
    UniProtKB/TrEMBL
    A2AHG3, F6URE6
    Related
    ENSMUSP00000106923.2, ENSMUST00000111292.8
    Conserved Domains (2) summary
    COG5034
    Location:257 → 413
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:367 → 409
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    92014096..92195011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006498967.4 → XP_006499030.1  PHD finger protein 21A isoform X3

    See identical proteins and their annotated locations for XP_006499030.1

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Related
    ENSMUSP00000106924.3, ENSMUST00000111293.9
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  2. XM_030248695.2 → XP_030104555.1  PHD finger protein 21A isoform X6

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:497 → 539
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  3. XM_030248704.2 → XP_030104564.1  PHD finger protein 21A isoform X10

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (3) summary
    COG5034
    Location:340 → 496
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:450 → 492
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
    pfam01017
    Location:3 → 62
    STAT_alpha; STAT protein, all-alpha domain

  4. XM_030248709.2 → XP_030104569.1  PHD finger protein 21A isoform X12

    UniProtKB/TrEMBL
    F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:414 → 456
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  5. XM_030248688.2 → XP_030104548.1  PHD finger protein 21A isoform X3

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  6. XM_030248698.2 → XP_030104558.1  PHD finger protein 21A isoform X6

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:497 → 539
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  7. XM_030248707.2 → XP_030104567.1  PHD finger protein 21A isoform X11

    UniProtKB/TrEMBL
    D3Z764, F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:415 → 457
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  8. XM_036159680.1 → XP_036015573.1  PHD finger protein 21A isoform X12

    UniProtKB/TrEMBL
    F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:414 → 456
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  9. XM_011239373.4 → XP_011237675.1  PHD finger protein 21A isoform X2

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:505 → 547
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  10. XM_006498975.5 → XP_006499038.1  PHD finger protein 21A isoform X5

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  11. XM_006498980.5 → XP_006499043.1  PHD finger protein 21A isoform X11

    See identical proteins and their annotated locations for XP_006499043.1

    UniProtKB/TrEMBL
    D3Z764, F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:415 → 457
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  12. XM_006498971.5 → XP_006499034.1  PHD finger protein 21A isoform X3

    See identical proteins and their annotated locations for XP_006499034.1

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  13. XM_036159673.1 → XP_036015566.1  PHD finger protein 21A isoform X5

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  14. XM_030248691.2 → XP_030104551.1  PHD finger protein 21A isoform X4

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  15. XM_036159674.1 → XP_036015567.1  PHD finger protein 21A isoform X6

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:497 → 539
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  16. XM_030248708.2 → XP_030104568.1  PHD finger protein 21A isoform X11

    UniProtKB/TrEMBL
    D3Z764, F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:415 → 457
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  17. XM_030248715.2 → XP_030104575.1  PHD finger protein 21A isoform X12

    UniProtKB/TrEMBL
    F6URE6
    Related
    ENSMUSP00000123955.2, ENSMUST00000159961.8
    Conserved Domains (1) summary
    cd15523
    Location:414 → 456
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  18. XM_030248703.2 → XP_030104563.1  PHD finger protein 21A isoform X8

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (2) summary
    COG5034
    Location:341 → 497
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:451 → 493
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  19. XM_017316533.3 → XP_017172022.1  PHD finger protein 21A isoform X7

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (2) summary
    COG5034
    Location:348 → 504
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:458 → 500
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  20. XM_017316543.3 → XP_017172032.1  PHD finger protein 21A isoform X9

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (3) summary
    COG5034
    Location:341 → 497
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:451 → 493
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
    pfam01017
    Location:3 → 62
    STAT_alpha; STAT protein, all-alpha domain

  21. XM_017316548.3 → XP_017172037.1  PHD finger protein 21A isoform X11

    UniProtKB/TrEMBL
    D3Z764, F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:415 → 457
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  22. XM_036159679.1 → XP_036015572.1  PHD finger protein 21A isoform X12

    UniProtKB/TrEMBL
    F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:414 → 456
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  23. XM_036159677.1 → XP_036015570.1  PHD finger protein 21A isoform X11

    UniProtKB/TrEMBL
    D3Z764, F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:415 → 457
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  24. XM_036159681.1 → XP_036015574.1  PHD finger protein 21A isoform X12

    UniProtKB/TrEMBL
    F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:414 → 456
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  25. XM_030248712.2 → XP_030104572.1  PHD finger protein 21A isoform X12

    UniProtKB/TrEMBL
    F6URE6
    Conserved Domains (1) summary
    cd15523
    Location:414 → 456
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  26. XM_036159683.1 → XP_036015576.1  PHD finger protein 21A isoform X13

    UniProtKB/TrEMBL
    F6URE6
    Conserved Domains (2) summary
    COG5034
    Location:258 → 414
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:368 → 410
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  27. XM_036159685.1 → XP_036015578.1  PHD finger protein 21A isoform X14

    UniProtKB/TrEMBL
    A2AHG3, F6URE6
    Conserved Domains (2) summary
    COG5034
    Location:257 → 413
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:367 → 409
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  28. XM_011239364.3 → XP_011237666.1  PHD finger protein 21A isoform X1

    See identical proteins and their annotated locations for XP_011237666.1

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:506 → 548
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  29. XM_036159666.1 → XP_036015559.1  PHD finger protein 21A isoform X2

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:505 → 547
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  30. XM_011239362.3 → XP_011237664.1  PHD finger protein 21A isoform X1

    See identical proteins and their annotated locations for XP_011237664.1

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:506 → 548
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  31. XM_030248696.2 → XP_030104556.1  PHD finger protein 21A isoform X6

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:497 → 539
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  32. XM_017316527.3 → XP_017172016.1  PHD finger protein 21A isoform X3

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  33. XM_036159671.1 → XP_036015564.1  PHD finger protein 21A isoform X4

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  34. XM_030248682.2 → XP_030104542.1  PHD finger protein 21A isoform X3

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  35. XM_006498970.5 → XP_006499033.1  PHD finger protein 21A isoform X3

    See identical proteins and their annotated locations for XP_006499033.1

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  36. XM_036159672.1 → XP_036015565.1  PHD finger protein 21A isoform X4

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  37. XM_030248685.2 → XP_030104545.1  PHD finger protein 21A isoform X3

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  38. XM_036159669.1 → XP_036015562.1  PHD finger protein 21A isoform X3

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  39. XM_030248702.2 → XP_030104562.1  PHD finger protein 21A isoform X8

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (2) summary
    COG5034
    Location:341 → 497
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    cd15523
    Location:451 → 493
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  40. XM_030248692.2 → XP_030104552.1  PHD finger protein 21A isoform X5

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  41. XM_030248693.2 → XP_030104553.1  PHD finger protein 21A isoform X5

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    Conserved Domains (1) summary
    cd15523
    Location:498 → 540
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

  42. XM_036159670.1 → XP_036015563.1  PHD finger protein 21A isoform X3

    UniProtKB/Swiss-Prot
    A2AHG2, Q6XVG0, Q6ZPK0, Q80Z33, Q8CAZ4, Q8VEC8
    UniProtKB/TrEMBL
    A0A498WGG5
    Conserved Domains (1) summary
    cd15523
    Location:499 → 541
    PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

RNA

  1. XR_004939029.1 RNA Sequence

  2. XR_004939031.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6ZPK0.3 GenPept UniProtKB/Swiss-Prot:Q6ZPK0

Gene LinkOut

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