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Polr2d-ps2 polymerase (RNA) II (DNA directed) polypeptide D, pseudogene 2 [ Mus musculus (house mouse) ]

Gene ID: 195712, updated on 17-Aug-2024

Summary

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Official Symbol
Polr2d-ps2provided by MGI
Official Full Name
polymerase (RNA) II (DNA directed) polypeptide D, pseudogene 2provided by MGI
Primary source
MGI:MGI:6433855
See related
AllianceGenome:MGI:6433855
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm53050; 4930421p07rik
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Genomic context

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See Polr2d-ps2 in Genome Data Viewer
Location:
5; 5 B3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (38731863..38732792, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (38574520..38575449, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 54329 Neighboring gene WD repeat domain 1 Neighboring gene predicted gene, 22249 Neighboring gene STARR-positive B cell enhancer ABC_E6325 Neighboring gene STARR-seq mESC enhancer starr_12921 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:39023837-39024020 Neighboring gene STARR-seq mESC enhancer starr_12923 Neighboring gene STARR-seq mESC enhancer starr_12924 Neighboring gene zinc finger protein 518B Neighboring gene STARR-seq mESC enhancer starr_12927 Neighboring gene predicted gene, 22779

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_068940.1 

    Range
    101..1030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    38731863..38732792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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