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Reg2 regenerating islet-derived 2 [ Mus musculus (house mouse) ]

Gene ID: 19693, updated on 13-Jan-2025

Summary

Official Symbol
Reg2provided by MGI
Official Full Name
regenerating islet-derived 2provided by MGI
Primary source
MGI:MGI:97896
See related
Ensembl:ENSMUSG00000023140 AllianceGenome:MGI:97896
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PSP; PTP; REG-2
Summary
Predicted to enable several functions, including molecular function inhibitor activity; oligosaccharide binding activity; and peptidoglycan binding activity. Acts upstream of or within myelination and suckling behavior. Located in collagen-containing extracellular matrix. Is expressed in several structures, including gut; male reproductive gland or organ; and mesenteric adipose tissue. Human ortholog(s) of this gene implicated in type 1 diabetes mellitus. Orthologous to several human genes including REG1A (regenerating family member 1 alpha). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Restricted expression toward small intestine adult (RPKM 155.3) See more
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Genomic context

See Reg2 in Genome Data Viewer
Location:
6 C3; 6 34.77 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (78382138..78385082)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (78405155..78408099)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene regenerating islet-derived 3 delta Neighboring gene regenerating islet-derived 3 alpha Neighboring gene STARR-seq mESC enhancer starr_16390 Neighboring gene regenerating islet-derived 1 Neighboring gene nuclease-sensitive element-binding protein 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (3)  1 citation

General gene information

Markers

Clone Names

  • MGC107500

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 
enables molecular function inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
enables oligosaccharide binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables peptidoglycan binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within myelination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of cell population proliferation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in response to peptide hormone IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within suckling behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix HDA PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
lithostathine-2
Names
islet of Langerhans regenerating protein 2
pancreatic stone protein 2
pancreatic thread protein 2
regenerating islet-derived, mouse homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009043.2NP_033069.1  lithostathine-2 precursor

    See identical proteins and their annotated locations for NP_033069.1

    Status: VALIDATED

    Source sequence(s)
    AC113058, AK008196, BC098503
    Consensus CDS
    CCDS20256.1
    UniProtKB/Swiss-Prot
    Q08731
    UniProtKB/TrEMBL
    Q545J0
    Related
    ENSMUSP00000023906.3, ENSMUST00000023906.4
    Conserved Domains (1) summary
    cl02432
    Location:43171
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    78382138..78385082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)