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lncRNA:CR45723 long non-coding RNA:CR45723 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 19835467, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR45723provided by FlyBase
Official Full Name
long non-coding RNA:CR45723provided by FlyBase
Primary source
FLYBASE:FBgn0267287
Locus tag
Dmel_CR45723
See related
AllianceGenome:FB:FBgn0267287
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR45723; Dmel\CR45723
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Genomic context

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See lncRNA:CR45723 in Genome Data Viewer
Location:
37E3-37E3; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (19470065..19470724, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (19470065..19470724, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene traffic jam Neighboring gene long non-coding RNA:CR45722 Neighboring gene long non-coding RNA:CR43839 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Specification and spatial arrangement of cells in the germline stem cell niche of the Drosophila ovary depend on the Maf transcription factor Traffic jam. Panchal T, et al. PLoS Genet, 2017 May. PMID 28542174, Free PMC Article
  2. Spatially revealed roles for lncRNAs in Drosophila spermatogenesis, Y chromosome function and evolution. Shao Z, et al. Nat Commun, 2024 May 7. PMID 38714658, Free PMC Article
  3. Critical roles of long noncoding RNAs in Drosophila spermatogenesis. Wen K, et al. Genome Res, 2016 Sep. PMID 27516619, Free PMC Article
  4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR45723-RA; Dmel\lncRNA:CR45723-RA; CR45723-RA; Dmel\CR45723-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    19470065..19470724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_124383.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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