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lncRNA:CR42736 long non-coding RNA:CR42736 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 19835508, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR42736provided by FlyBase
Official Full Name
long non-coding RNA:CR42736provided by FlyBase
Primary source
FLYBASE:FBgn0261700
Locus tag
Dmel_CR42736
See related
AllianceGenome:FB:FBgn0261700
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG42736; CR42736; Dmel\CR42736
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Genomic context

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See lncRNA:CR42736 in Genome Data Viewer
Location:
55C4-55C4; 2-85 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18377487..18378196)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14264992..14265701)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene scribbler Neighboring gene uncharacterized protein Neighboring gene Transport and Golgi organization 8 Neighboring gene Bomanin Bicipital 1 Neighboring gene Bomanin Tailed 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
  2. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
  3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR42736-RB; Dmel\lncRNA:CR42736-RB; CR42736-RB; Dmel\CR42736-RB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    18377487..18378196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_124617.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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