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Rnu3b-ps3 U3B small nuclear RNA pseudogene 3 [ Mus musculus (house mouse) ]

Gene ID: 19854, updated on 17-Aug-2024

Summary

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Official Symbol
Rnu3b-ps3provided by MGI
Official Full Name
U3B small nuclear RNA pseudogene 3provided by MGI
Primary source
MGI:MGI:97981
See related
AllianceGenome:MGI:97981
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Rnu3b-ps3 in Genome Data Viewer
Location:
12 E; 12 51.45 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (102219632..102220044)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (102253373..102253785)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1452 Neighboring gene ataxin 3 Neighboring gene STARR-seq mESC enhancer starr_33093 Neighboring gene NADH:ubiquinone oxidoreductase subunit B1 Neighboring gene cleavage and polyadenylation specific factor 2 Neighboring gene solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 Neighboring gene predicted gene, 25203 Neighboring gene Ras and Rab interactor 3 Neighboring gene STARR-seq mESC enhancer starr_33096 Neighboring gene STARR-positive B cell enhancer ABC_E1862 Neighboring gene legumain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mouse U3-RNA-processed pseudogenes are nonrandomly integrated into genomic DNA. Implications for the process of retrogene formation. Mazan S, et al. Eur J Biochem, 1989 May 15. PMID 2543563
  2. Composition and chromosomal localization of the small multigene family encoding mouse U3B nucleolar RNA. Mazan S, et al. Cytogenet Cell Genet, 1991. PMID 2004550

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001443.5 

    Range
    101..513
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    102219632..102220044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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