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Tyms-ps thymidylate synthase, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 22172, updated on 17-Aug-2024

Summary

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Official Symbol
Tyms-psprovided by MGI
Official Full Name
thymidylate synthase, pseudogeneprovided by MGI
Primary source
MGI:MGI:98879
See related
AllianceGenome:MGI:98879
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Tyms-ps in Genome Data Viewer
Location:
10 C1; 10 43.7 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (87802533..87803879)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (87966671..87968017)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA lysine 21 (anticodon TTT) Neighboring gene insulin-like growth factor 1, opposite strand Neighboring gene VISTA enhancer mm694 Neighboring gene insulin-like growth factor 1 Neighboring gene STARR-seq mESC enhancer starr_27486 Neighboring gene STARR-seq mESC enhancer starr_27487 Neighboring gene STARR-seq mESC enhancer starr_27490 Neighboring gene STARR-seq mESC enhancer starr_27491 Neighboring gene predicted gene, 30233 Neighboring gene PARP1 binding protein Neighboring gene pro-melanin-concentrating hormone

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A mouse thymidylate synthase pseudogene derived from an aberrantly processed RNA molecule. Li DW, et al. Gene, 1989 Oct 30. PMID 2573561
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_000040.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC139754

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    87802533..87803879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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