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PDI-2 protein disulfide isomerase [ Leishmania panamensis ]

Gene ID: 22579743, updated on 30-Oct-2024

Summary

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Gene symbol
PDI-2
Gene description
protein disulfide isomerase
Locus tag
LPMP_357150
See related
TriTrypDB:LPMP_357150; VEuPathDB:LPMP_357150
Gene type
protein coding
RNA name
protein disulfide isomerase
RefSeq status
PROVISIONAL
Organism
Leishmania panamensis (strain: MHOM/PA/94/PSC-1)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania guyanensis species complex
Orthologs
Leishmania major all
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Genomic context

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Location:
chromosome: 35
Exon count:
1
Sequence:
Chromosome: 35; NC_025882.1 (2592491..2593903, complement)

Chromosome 35 - NC_025882.1Genomic Context describing neighboring genes Neighboring gene RNA editing comple protein MP63 Neighboring gene hypothetical protein Neighboring gene delta-6 fatty acid desaturase, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025882.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Leishmania panamensis: insights into genomics of the L. (Viannia) subgenus. Llanes A, et al. Sci Rep, 2015 Feb 24. PMID 25707621, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein disulfide isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to endoplasmic reticulum stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
protein disulfide isomerase
XP_010703642.1
  • TriTrypDB/GeneDB-style sysID: LpmP.35.7150

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_025882.1 Reference assembly

    Range
    2592491..2593903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010705340.1 → XP_010703642.1  protein disulfide isomerase [Leishmania panamensis]

    See identical proteins and their annotated locations for XP_010703642.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A088SLZ1
    Conserved Domains (5) summary
    cd02981
    Location:128 → 219
    PDI_b_family; Protein Disulfide Isomerase (PDIb) family, redox inactive TRX-like domain b; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family ...
    cd02982
    Location:231 → 333
    PDI_b'_family; Protein Disulfide Isomerase (PDIb') family, redox inactive TRX-like domain b'; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family ...
    cd02995
    Location:356 → 454
    PDI_a_PDI_a'_C; PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein ...
    TIGR01130
    Location:21 → 462
    ER_PDI_fam; protein disulfide isomerase, eukaryotic
    cl00388
    Location:26 → 123
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
Nucleotide Protein
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Other Literature Sources
Molecular Biology Databases