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Zp1 zona pellucida glycoprotein 1 [ Mus musculus (house mouse) ]

Gene ID: 22786, updated on 27-Nov-2024

Summary

Official Symbol
Zp1provided by MGI
Official Full Name
zona pellucida glycoprotein 1provided by MGI
Primary source
MGI:MGI:103073
See related
Ensembl:ENSMUSG00000024734 AllianceGenome:MGI:103073
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable acrosin binding activity. Predicted to be a structural constituent of egg coat. Predicted to be involved in binding activity of sperm to zona pellucida and prevention of polyspermy. Located in collagen-containing extracellular matrix. Is expressed in early conceptus; ovary; and secondary oocyte. Orthologous to human ZP1 (zona pellucida glycoprotein 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward ovary adult (RPKM 22.1) See more
Orthologs
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Genomic context

See Zp1 in Genome Data Viewer
Location:
19 A; 19 7.36 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (10891660..10897965, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (10914296..10920601, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 109 Neighboring gene STARR-positive B cell enhancer ABC_E2520 Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:10956481-10956590 Neighboring gene STARR-positive B cell enhancer ABC_E8738 Neighboring gene pre-mRNA processing factor 19 Neighboring gene prostaglandin D2 receptor 2 Neighboring gene STARR-positive B cell enhancer ABC_E5689 Neighboring gene coiled-coil domain containing 86 Neighboring gene membrane-spanning 4-domains, subfamily A, member 10 Neighboring gene STARR-seq mESC enhancer starr_45563

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (2)  1 citation

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables acrosin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of egg coat IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of egg coat ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in binding of sperm to zona pellucida IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in prevention of polyspermy IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in single fertilization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in collagen-containing extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in collagen-containing extracellular matrix IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in egg coat IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in egg coat ISO
Inferred from Sequence Orthology
more info
 
located_in egg coat ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zona pellucida sperm-binding protein 1
Names
zp-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009580.2NP_033606.2  zona pellucida sperm-binding protein 1 precursor

    See identical proteins and their annotated locations for NP_033606.2

    Status: VALIDATED

    Source sequence(s)
    BC125613
    Consensus CDS
    CCDS37918.1
    UniProtKB/Swiss-Prot
    Q62005, Q62016
    UniProtKB/TrEMBL
    Q059L1
    Related
    ENSMUSP00000025641.2, ENSMUST00000025641.2
    Conserved Domains (3) summary
    smart00018
    Location:226268
    PD; P or trefoil or TFF domain
    smart00241
    Location:271541
    ZP; Zona pellucida (ZP) domain
    pfam00100
    Location:404539
    Zona_pellucida; Zona pellucida-like domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    10891660..10897965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)