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CAOG_08784 hypothetical protein [ Capsaspora owczarzaki ATCC 30864 ]

Gene ID: 23302181, updated on 9-Nov-2023

Summary

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Gene symbol
CAOG_08784
Gene description
hypothetical protein
Locus tag
CAOG_08784
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Capsaspora owczarzaki ATCC 30864 (strain: ATCC 30864, nat-host: pulmonate snail, culture-collection: ATCC:30864)
Lineage
Eukaryota; Filasterea; Capsaspora
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Genomic context

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See CAOG_08784 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
9

NW_011887297.1Genomic Context describing neighboring genes Neighboring gene transcription factor FET5 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene glycosylphosphatidylinositol specific phospholipase D1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011887297.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011887297.1 Reference assembly

    Range
    1566803..1571284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011272112.1 → XP_011270414.1  hypothetical protein CAOG_08784 [Capsaspora owczarzaki ATCC 30864]

    See identical proteins and their annotated locations for XP_011270414.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D2UF69
    Conserved Domains (2) summary
    cd00159
    Location:552 → 725
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
    cl12013
    Location:35 → 308
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
EPH53492.1

Gene LinkOut

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Molecular Biology Databases