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4930596D02Rik RIKEN cDNA 4930596D02 gene [ Mus musculus (house mouse) ]

Gene ID: 239036, updated on 27-Nov-2024

Summary

Official Symbol
4930596D02Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930596D02 geneprovided by MGI
Primary source
MGI:MGI:3588288
See related
Ensembl:ENSMUSG00000041068 AllianceGenome:MGI:3588288
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 25.2) See more
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Genomic context

See 4930596D02Rik in Genome Data Viewer
Location:
14 B; 14 20.88 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (35531443..35533935, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (35809486..35811978, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor, ionotropic, delta 1 Neighboring gene predicted gene, 41133 Neighboring gene STARR-seq mESC enhancer starr_36407 Neighboring gene NSA2 ribosome biogenesis homolog pseudogene Neighboring gene STARR-seq mESC enhancer starr_36408 Neighboring gene STARR-seq mESC enhancer starr_36409 Neighboring gene STARR-seq mESC enhancer starr_36410 Neighboring gene STARR-seq mESC enhancer starr_36411 Neighboring gene sorting nexin 15 pseudogene Neighboring gene predicted gene, 46474

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC239036

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033766.3NP_001028938.1  uncharacterized protein LOC239036

    See identical proteins and their annotated locations for NP_001028938.1

    Status: PREDICTED

    Source sequence(s)
    AC158395
    Consensus CDS
    CCDS49447.1
    UniProtKB/TrEMBL
    Q3V0H9
    Related
    ENSMUSP00000039186.6, ENSMUST00000043266.7
    Conserved Domains (1) summary
    cd06224
    Location:73188
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    35531443..35533935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)