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Kctd12 potassium channel tetramerisation domain containing 12 [ Mus musculus (house mouse) ]

Gene ID: 239217, updated on 4-Jan-2025

Summary

Official Symbol
Kctd12provided by MGI
Official Full Name
potassium channel tetramerisation domain containing 12provided by MGI
Primary source
MGI:MGI:2145823
See related
Ensembl:ENSMUSG00000098557 AllianceGenome:MGI:2145823
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Pfet1; Pfetin
Summary
Enables G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential and G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential. Acts upstream of or within regulation of G protein-coupled receptor signaling pathway. Part of receptor complex. Is active in GABA-ergic synapse; postsynaptic membrane; and presynaptic active zone membrane. Is expressed in several structures, including central nervous system; eye; genitourinary system; gut; and inner ear. Orthologous to human KCTD12 (potassium channel tetramerization domain containing 12). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Kctd12 in Genome Data Viewer
Location:
14 E2.3; 14 51.55 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (103214017..103220073, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (102976581..102982637, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4124 Neighboring gene predicted gene, 41234 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:103209351-103209504 Neighboring gene predicted gene, 34589 Neighboring gene STARR-positive B cell enhancer ABC_E11577 Neighboring gene STARR-positive B cell enhancer ABC_E8575 Neighboring gene STARR-positive B cell enhancer ABC_E7345 Neighboring gene STARR-positive B cell enhancer ABC_E7346 Neighboring gene STARR-positive B cell enhancer ABC_E5463 Neighboring gene STARR-positive B cell enhancer ABC_E10837 Neighboring gene RIKEN cDNA 4933432I03 gene Neighboring gene STARR-positive B cell enhancer mm9_chr14:103394496-103394797 Neighboring gene microRNA 5130 Neighboring gene STARR-positive B cell enhancer ABC_E11578 Neighboring gene ribosomal protein L17, pseudogene 7 Neighboring gene predicted gene, 34643

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in GABA-ergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in GABA-ergic synapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
is_active_in postsynaptic membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in presynaptic active zone membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in presynaptic membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in presynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in presynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
part_of receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of receptor complex IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
BTB/POZ domain-containing protein KCTD12
Names
potassium channel tetramerization domain containing 12
predominantly fetal expressed T1 domain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177715.4NP_808383.3  BTB/POZ domain-containing protein KCTD12

    See identical proteins and their annotated locations for NP_808383.3

    Status: VALIDATED

    Source sequence(s)
    AK087895, AK173260, BP753689, CF538046
    Consensus CDS
    CCDS70611.1
    UniProtKB/Swiss-Prot
    Q3T9E3, Q6WVG3
    UniProtKB/TrEMBL
    A0A0R4J2B2
    Related
    ENSMUSP00000139261.2, ENSMUST00000184744.2
    Conserved Domains (1) summary
    cl02518
    Location:36125
    BTB; BTB/POZ domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    103214017..103220073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)