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ttr-41 Transthyretin-like family protein [ Caenorhabditis elegans ]

Gene ID: 24104420, updated on 9-Dec-2024

Summary

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Official Symbol
ttr-41
Official Full Name
Transthyretin-like family protein
Primary source
WormBase:WBGene00017374
Locus tag
CELE_F10G7.11
See related
AllianceGenome:WB:WBGene00017374
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in cell surface and extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See ttr-41 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003280.10 (4727328..4727869, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Pre-rRNA-processing protein TSR1 homolog Neighboring gene E3 ubiquitin-protein ligase Neighboring gene MARVEL domain-containing protein Neighboring gene Ovule protein;WD_REPEATS_REGION domain-containing protein Neighboring gene Nucleotide-diphospho-sugar transferase domain-containing protein Neighboring gene Serine carboxypeptidase ctsa-1.1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
  2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transthyretin-like family protein
NP_001293509.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    4727328..4727869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001306580.4 → NP_001293509.1  Transthyretin-like family protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293509.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86NH9
    Conserved Domains (1) summary
    pfam01060
    Location:25 → 104
    TTR-52; Transthyretin-like family
Nucleotide Protein
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Gene LinkOut

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Research Materials