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hfq RNA chaperone Hfq [ Neorhizobium galegae bv. orientalis str. HAMBI 540 ]

Gene ID: 24256676, updated on 11-Dec-2024

Summary

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Gene symbol
hfq
Gene description
RNA chaperone Hfq
Locus tag
RG540_RS07970
Gene type
protein coding
Organism
Neorhizobium galegae bv. orientalis str. HAMBI 540 (strain: HAMBI 540, biovar: orientalis, type-material: type strain of Rhizobium galegae)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium
Old locus tag
RG540_CH16180
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Genomic context

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Location:
chromosome: I

I - NZ_HG938353.1Genomic Context describing neighboring genes Neighboring gene Trk system potassium transporter TrkA Neighboring gene D-amino-acid transaminase Neighboring gene GTPase HflX Neighboring gene acyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_HG938353.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The RNA chaperone Hfq impacts growth, metabolism and production of virulence factors in Yersinia enterocolitica. Kakoschke T, et al. PLoS One, 2014. PMID 24454955, Free PMC Article
  2. Hfq regulates anti-oxidative ability in Vibrio parahaemolyticus. Su Z, et al. J Gen Appl Microbiol, 2010 Jun. PMID 20647674
  3. Structure of Pseudomonas aeruginosa Hfq protein. Nikulin A, et al. Acta Crystallogr D Biol Crystallogr, 2005 Feb. PMID 15681864
  4. Genome sequencing of two Neorhizobium galegae strains reveals a noeT gene responsible for the unusual acetylation of the nodulation factors. Österman J, et al. BMC Genomics, 2014 Jun 19. PMID 24948393, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RNA chaperone Hfq

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_HG938353.1 Reference assembly

    Range
    1556500..1556742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_007757453.1 MULTISPECIES: RNA chaperone Hfq [Rhizobiaceae]

    See identical proteins and their annotated locations for WP_007757453.1

    UniProtKB/TrEMBL
    A0A068SRU4, A0A068T5Y1, A0A0Q5DC50, A0A0T7H102, A0A1H6GM19, A0A1I1APX5, A0A346YME4, A0A4Q3HXF1, A0A4R3A3E4, A0A5C4XFF3, A0A6A1TQ71, A0A6A8A6X8, A0A7W4XGZ7, A0A7W9Y2E7, W6VXV7
    Conserved Domains (1) summary
    PRK00395
    Location:2 → 80
    hfq; RNA-binding protein Hfq; Provisional
Nucleotide Protein
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