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LOC252890 Z39 small nucleolar RNA [ Rattus norvegicus (Norway rat) ]

Gene ID: 252890, updated on 17-Aug-2024

Summary

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Symbol
LOC252890provided by RGD
Full Name
Z39 small nucleolar RNAprovided by RGD
Primary source
RGD:727842
See related
EnsemblRapid:ENSRNOG00000054767 AllianceGenome:RGD:727842
Gene type
snRNA
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

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See LOC252890 in Genome Data Viewer
Location:
2q11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (18577345..18577404, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (16841971..16842030, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (14700078..14700137, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene histone H2A.Z pseudogene Neighboring gene eukaryotic translation elongation factor 1 delta, pseudogene 1 Neighboring gene cytochrome c oxidase subunit 7C Neighboring gene discoidin, CUB and LCCL domain containing 1, pseudogene 1 Neighboring gene voltage-dependent anion channel 1, pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002705.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AJ240058
    Related
    ENSRNOT00000081137.3

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    18577345..18577404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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