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jnm1 dynactin complex subunit dynamitin [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538878, updated on 18-Sep-2024

Summary

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Official Symbol
jnm1
Official Full Name
dynactin complex subunit dynamitin
Primary source
PomBase:SPCC11E10.03
Locus tag
SPOM_SPCC11E10.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
mug1
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Genomic context

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See jnm1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (1456213..1457855)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene cystathionine beta-lyase Neighboring gene ncRNA Neighboring gene pig-K Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PPR-repeat protein ppr6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dynactin and Num1 cooperate to establish the cortical anchoring of cytoplasmic dynein in S. pombe. Fujita I, et al. J Cell Sci, 2015 Apr 15. PMID 25736293
  2. Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Dixon SJ, et al. Proc Natl Acad Sci U S A, 2008 Oct 28. PMID 18931302, Free PMC Article
  3. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Dynein anchoring is established by cooperation of transient assembly of dynactin and function of Num1 at the cell cortex.
    Title: Dynactin and Num1 cooperate to establish the cortical anchoring of cytoplasmic dynein in S. pombe.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to cytoskeletal protein-membrane anchor activity EXP
Inferred from Experiment
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in dynein-driven meiotic oscillatory nuclear movement IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in mitotic spindle organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in nuclear migration by microtubule mediated pushing forces IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
part_of dynactin complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of dynactin complex IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
dynactin complex subunit dynamitin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1456213..1457855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023189.3 → NP_588199.1  dynactin complex subunit dynamitin [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588199.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9USP4
    Conserved Domains (1) summary
    pfam04912
    Location:269 → 350
    Dynamitin; Dynamitin
Nucleotide Protein
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