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dcw1 mannan endo-1,6-alpha-mannosidase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538908, updated on 18-Sep-2024

Summary

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Official Symbol
dcw1
Official Full Name
mannan endo-1,6-alpha-mannosidase
Primary source
PomBase:SPCC970.02
Locus tag
SPOM_SPCC970.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See dcw1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003421.2 (511766..513540, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein kinase activator Mob2 Neighboring gene ncRNA Neighboring gene cytochrome b5 reductase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene kinetochore protein Mis18 Neighboring gene DNA repair endonuclease XPF Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mannan endo-1,6-alpha-mannosidase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in fungal-type cell wall biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in external side of plasma membrane ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
mannan endo-1,6-alpha-mannosidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    511766..513540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022846.3 → NP_587853.1  mannan endo-1,6-alpha-mannosidase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587853.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74556
    Conserved Domains (1) summary
    pfam03663
    Location:29 → 377
    Glyco_hydro_76; Glycosyl hydrolase family 76
Nucleotide Protein
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