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dao1 D-amino acid oxidase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539033, updated on 14-Nov-2024

Summary

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Official Symbol
dao1
Official Full Name
D-amino acid oxidase
Primary source
PomBase:SPCC1450.07c
Locus tag
SPOM_SPCC1450.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See dao1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (1736500..1738272, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene mediator complex subunit Med19 Neighboring gene ncRNA Neighboring gene CIA machinery monothiol glutaredoxin Grx3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene wtf antidote-like meiotic drive suppressor Wtf16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Growth of transplastomic cells expressing D-amino acid oxidase in chloroplasts is tolerant to D-alanine and inhibited by D-valine. Gisby MF, et al. Plant Physiol, 2012 Dec. PMID 23085840, Free PMC Article
  2. D-amino acid-induced expression of D-amino acid oxidase in the yeast Schizosaccharomyces pombe. Takahashi S, et al. Curr Microbiol, 2012 Dec. PMID 22986818
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables D-amino-acid oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables D-amino-acid oxidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
  
enables glycine oxidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in D-alanine metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in D-amino acid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in D-amino acid metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in D-valine metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in nitrogen utilization ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in peroxisomal matrix ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
D-amino acid oxidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1736500..1738272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001355932.2 → NP_001342883.1  D-amino acid oxidase [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7N4
    Conserved Domains (1) summary
    pfam01266
    Location:9 → 334
    DAO; FAD dependent oxidoreductase
Nucleotide Protein
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