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fmn1 riboflavin kinase Fmn1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539192, updated on 18-Sep-2024

Summary

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Official Symbol
fmn1
Official Full Name
riboflavin kinase Fmn1
Primary source
PomBase:SPCC18.16c
Locus tag
SPOM_SPCC18.16C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See fmn1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (1985203..1985999, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene WD repeat-containing protein Neighboring gene ncRNA Neighboring gene proteasome non-ATPase regulatory subunit Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene fumarate hydratase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of Schizosaccharomyces pombe riboflavin kinase reveals a novel ATP and riboflavin-binding fold. Bauer S, et al. J Mol Biol, 2003 Mar 7. PMID 12595258
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables riboflavin kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables riboflavin kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables zinc ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in FMN biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in FMN biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in riboflavin biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in riboflavin metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in mitochondrial inner membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
riboflavin kinase Fmn1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1985203..1985999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023386.3 → NP_588395.1  riboflavin kinase Fmn1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588395.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74866
    Conserved Domains (1) summary
    PLN02940
    Location:28 → 162
    PLN02940; riboflavin kinase
Nucleotide Protein
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