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skb5 Shk1 kinase-binding protein 5 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539237, updated on 18-Sep-2024

Summary

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Official Symbol
skb5
Official Full Name
Shk1 kinase-binding protein 5
Primary source
PomBase:SPCC24B10.13
Locus tag
SPOM_SPCC24B10.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
skb2
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Genomic context

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See skb5 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (922634..923491)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene THO complex subunit Tho7 Neighboring gene EKC/KEOPS complex subunit Cgi121 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene XRCC4-like factor xlf1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Direct activation of the fission yeast PAK Shk1 by the novel SH3 domain protein, Skb5. Yang P, et al. J Biol Chem, 1999 Dec 17. PMID 10593886
  2. Skb5, an SH3 adaptor protein, regulates Pmk1 MAPK signaling by controlling the intracellular localization of the MAPKKK Mkh1. Kanda Y, et al. J Cell Sci, 2016 Aug 15. PMID 27451356
  3. Yeast adaptor protein, Nbp2p, is conserved regulator of fungal Ptc1p phosphatases and is involved in multiple signaling pathways. Stanger K, et al. J Biol Chem, 2012 Jun 22. PMID 22570491, Free PMC Article
  4. Compartmentalized nodes control mitotic entry signaling in fission yeast. Deng L, et al. Mol Biol Cell, 2013 Jun. PMID 23615447, Free PMC Article
  5. Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways. Das J, et al. Sci Signal, 2013 May 21. PMID 23695164, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activator activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum HDA PubMed 

General protein information

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Preferred Names
Shk1 kinase-binding protein 5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    922634..923491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023007.2 → NP_588016.1  Shk1 kinase-binding protein 5 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588016.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9US59
    Conserved Domains (1) summary
    cd11865
    Location:84 → 138
    SH3_Nbp2-like; Src Homology 3 domain of Saccharomyces cerevisiae Nap1-binding protein 2 and similar fungal proteins
Nucleotide Protein
Heading Accession and Version

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