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trm82 tRNA (guanine-N7-)-methyltransferase subunit Trm82 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539246, updated on 18-Sep-2024

Summary

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Official Symbol
trm82
Official Full Name
tRNA (guanine-N7-)-methyltransferase subunit Trm82
Primary source
PomBase:SPCC18.13
Locus tag
SPOM_SPCC18.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See trm82 in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (1978521..1980365)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene pyridoxine-pyridoxal-pyridoxamine kinase Neighboring gene ncRNA Neighboring gene Set1C complex and Lid2 complex subunit, Dpy-30 domain Sdc1 Neighboring gene rRNA processing protein Utp23 Neighboring gene ncRNA Neighboring gene 60S ribosomal protein uL10 Neighboring gene uncharacterized protein Neighboring gene WD repeat-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  2. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in tRNA (guanine-N7)-methylation ISO
Inferred from Sequence Orthology
more info
  
involved_in tRNA modification IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of tRNA (m7G46) methyltransferase complex IC
Inferred by Curator
more info
  
part_of tRNA methyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
tRNA (guanine-N7-)-methyltransferase subunit Trm82

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1978521..1980365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023383.3 → NP_588392.1  tRNA (guanine-N7-)-methyltransferase subunit Trm82 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588392.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74863
    Conserved Domains (3) summary
    COG2319
    Location:63 → 267
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:66 → 104
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:65 → 260
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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