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tef3 translation elongation factor eEF3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539295, updated on 18-Sep-2024

Summary

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Official Symbol
tef3
Official Full Name
translation elongation factor eEF3
Primary source
PomBase:SPCC417.08
Locus tag
SPOM_SPCC417.08
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See tef3 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (1685645..1688951)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Ser Neighboring gene tRNA-Met

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Demonstration of translation elongation factor 3 activity from a non-fungal species, Phytophthora infestans. Mateyak MK, et al. PLoS One, 2018. PMID 29300771, Free PMC Article
  2. Fission yeast mitogen-activated protein kinase Sty1 interacts with translation factors. Asp E, et al. Eukaryot Cell, 2008 Feb. PMID 18065650, Free PMC Article
  3. Expression of hsp16 in response to nucleotide depletion is regulated via the spc1 MAPK pathway in Schizosaccharomyces pombe. Taricani L, et al. Nucleic Acids Res, 2001 Jul 15. PMID 11452028, Free PMC Article
  4. Silencing mediated by the Schizosaccharomyces pombe HIRA complex is dependent upon the Hpc2-like protein, Hip4. Anderson HE, et al. PLoS One, 2010 Oct 18. PMID 20976105, Free PMC Article
  5. The S. pombe translation initiation factor eIF4G is Sumoylated and associates with the SUMO protease Ulp2. Jongjitwimol J, et al. PLoS One, 2014. PMID 24818994, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ATP hydrolysis activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables translation elongation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables translation elongation factor activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in cytoplasmic translational elongation ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
translation elongation factor eEF3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1685645..1688951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023275.3 → NP_588285.1  translation elongation factor eEF3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588285.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94489, P78876, Q10266, Q9UUL5
    Conserved Domains (4) summary
    cd03221
    Location:435 → 623
    ABCF_EF-3; ATP-binding cassette domain of elongation factor 3, subfamily F
    COG0488
    Location:434 → 993
    Uup; ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
    sd00044
    Location:97 → 121
    HEAT; HEAT repeat [structural motif]
    cl21455
    Location:690 → 932
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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