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calcium ion binding protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539402, updated on 18-Sep-2024

Summary

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Official Full Name
calcium ion binding protein
Primary source
PomBase:SPCC613.03
Locus tag
SPOM_SPCC613.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (85327..88460)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene transporter Neighboring gene ncRNA Neighboring gene transporter Neighboring gene ncRNA Neighboring gene UCS-domain protein Rng3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 60S ribosomal protein L35 Neighboring gene 60S ribosomal protein L9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fission yeast Rnf4 homologs are required for DNA repair. Kosoy A, et al. J Biol Chem, 2007 Jul 13. PMID 17502373
  2. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  3. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
is_active_in Golgi lumen IEA
Inferred from Electronic Annotation
more info
  
is_active_in endoplasmic reticulum HDA PubMed 
is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
calcium ion binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    85327..88460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022686.3 → NP_587691.1  calcium ion binding protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587691.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74903
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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