U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ppn1 cleavage and polyadenylation specificity factor complex-associated protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539414, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
ppn1
Official Full Name
cleavage and polyadenylation specificity factor complex-associated protein
Primary source
PomBase:SPCC74.02c
Locus tag
SPOM_SPCC74.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ppn1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003421.2 (1924680..1928307, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene rrm type RNA-binding protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SNARE-binding protein Sly1 Neighboring gene ncRNA Neighboring gene serine/threonine protein kinase AMPK catalytic (alpha) subunit Ssp2 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Structure-function analysis of fission yeast cleavage and polyadenylation factor (CPF) subunit Ppn1 and its interactions with Dis2 and Swd22. Benjamin B, et al. PLoS Genet, 2021 Mar. PMID 33711009, Free PMC Article
  2. RNA polymerase II CTD interactome with 3' processing and termination factors in fission yeast and its impact on phosphate homeostasis. Sanchez AM, et al. Proc Natl Acad Sci U S A, 2018 Nov 6. PMID 30355770, Free PMC Article
  3. Genetic screen for suppression of transcriptional interference identifies a gain-of-function mutation in Pol2 termination factor Seb1. Schwer B, et al. Proc Natl Acad Sci U S A, 2021 Aug 17. PMID 34389684, Free PMC Article
  4. Genetic screen for suppression of transcriptional interference reveals fission yeast 14-3-3 protein Rad24 as an antagonist of precocious Pol2 transcription termination. Garg A, et al. Nucleic Acids Res, 2022 Jan 25. PMID 34967420, Free PMC Article
  5. CPF Recruitment to Non-canonical Transcription Termination Sites Triggers Heterochromatin Assembly and Gene Silencing. Vo TV, et al. Cell Rep, 2019 Jul 2. PMID 31269446, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of DPS complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
part_of mRNA cleavage and polyadenylation specificity factor complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of mRNA cleavage and polyadenylation specificity factor complex IPI
Inferred from Physical Interaction
more info
 PubMed 
is_active_in nucleus HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cleavage and polyadenylation specificity factor complex-associated protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1924680..1928307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023366.3 → NP_588375.1  cleavage and polyadenylation specificity factor complex-associated protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588375.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14392, O74535
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials