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sec26 coatomer beta subunit Sec26 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539798, updated on 18-Sep-2024

Summary

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Official Symbol
sec26
Official Full Name
coatomer beta subunit Sec26
Primary source
PomBase:SPBC146.14c
Locus tag
SPOM_SPBC146.14C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPBC337.01c
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Genomic context

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See sec26 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1028878..1031938, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene myosin I myo1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide screen for cell growth regulators in fission yeast. Weston L, et al. J Cell Sci, 2017 Jun 15. PMID 28476936, Free PMC Article
  2. Inner nuclear membrane proteins Lem2 and Bqt4 interact with different lipid synthesis enzymes in fission yeast. Hirano Y, et al. J Biochem, 2023 Jun 30. PMID 36799444
  3. The fission yeast FLCN/FNIP complex augments TORC1 repression or activation in response to amino acid (AA) availability. Calvo IA, et al. iScience, 2021 Nov 19. PMID 34805795, Free PMC Article
  4. SIN-inhibitory phosphatase complex promotes Cdc11p dephosphorylation and propagates SIN asymmetry in fission yeast. Singh NS, et al. Curr Biol, 2011 Dec 6. PMID 22119525, Free PMC Article
  5. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intra-Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular protein transport NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
part_of COPI vesicle coat IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in COPII-coated ER to Golgi transport vesicle IC
Inferred by Curator
more info
  
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
coatomer beta subunit Sec26

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1028878..1031938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021310.3 → NP_595403.1  coatomer beta subunit Sec26 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595403.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74812, Q9UUF7
    Conserved Domains (3) summary
    COG5096
    Location:1 → 923
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    pfam07718
    Location:671 → 807
    Coatamer_beta_C; Coatomer beta C-terminal region
    pfam14806
    Location:816 → 937
    Coatomer_b_Cpla; Coatomer beta subunit appendage platform
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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