U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gsf1 protein gsf1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539828, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
gsf1
Official Full Name
protein gsf1
Primary source
PomBase:SPBC15D4.02
Locus tag
SPOM_SPBC15D4.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See gsf1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3011512..3015079)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme Ubc1 Neighboring gene ncRNA Neighboring gene kinesin-6 family microtubule motor protein Klp9 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene histone H3.3-H4 chaperone, HIR complex WD repeat subunit Hip2 Neighboring gene ncRNA Neighboring gene UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Cell surface galactosylation is essential for nonsexual flocculation in Schizosaccharomyces pombe. Tanaka N, et al. J Bacteriol, 1999 Feb. PMID 9973368, Free PMC Article
  2. The zinc finger protein Gsf1 regulates Gsf2-dependent flocculation in fission yeast. Matsuzawa T, et al. FEMS Yeast Res, 2013 May. PMID 23311928
  3. MADS box transcription factor Mbx2/Pvg4 regulates invasive growth and flocculation by inducing gsf2+ expression in fission yeast. Matsuzawa T, et al. Eukaryot Cell, 2012 Feb. PMID 22180499, Free PMC Article
  4. Deciphering the transcriptional-regulatory network of flocculation in Schizosaccharomyces pombe. Kwon EJ, et al. PLoS Genet, 2012. PMID 23236291, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific ISM
Inferred from Sequence Model
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding ISM
Inferred from Sequence Model
more info
  
enables zinc ion binding ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in galactose-specific flocculation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of flocculation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in chromatin IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein gsf1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3011512..3015079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022161.3 → NP_596242.3  protein gsf1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596242.3

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74308
    Conserved Domains (1) summary
    smart00066
    Location:168 → 210
    GAL4; GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials