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rps27 40S ribosomal protein eS27 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539969, updated on 18-Sep-2024

Summary

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Official Symbol
rps27
Official Full Name
40S ribosomal protein eS27
Primary source
PomBase:SPBC1685.10
Locus tag
SPOM_SPBC1685.10
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rps27 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (517321..517984)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Rpd3L histone deacetylase complex PHD finger subunit Cti6 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 40S ribosomal protein uS14 Neighboring gene ncRNA Neighboring gene RecA family ATPase Rlp1 Neighboring gene ncRNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The N-terminus of Prp1 (Prp6/U5-102 K) is essential for spliceosome activation in vivo. Lützelberger M, et al. Nucleic Acids Res, 2010 Mar. PMID 20007600, Free PMC Article
  2. Isolation and characterization of Nrf1p, a novel negative regulator of the Cdc42p GTPase in Schizosaccharomyces pombe. Murray JM, et al. Genetics, 2000 Jan. PMID 10628977, Free PMC Article
  3. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
  4. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
  5. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation ISO
Inferred from Sequence Orthology
more info
  
involved_in ribosomal small subunit assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
40S ribosomal protein eS27

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    517321..517984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021121.3 → NP_595214.1  40S ribosomal protein eS27 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595214.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59867, O74330, Q9UUL6
    Conserved Domains (1) summary
    PLN00209
    Location:1 → 82
    PLN00209; ribosomal protein S27; Provisional
Nucleotide Protein
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