U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mfr1 ubiquitin ligase Mfr1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540043, updated on 18-Sep-2024

Summary

Official Symbol
mfr1
Official Full Name
ubiquitin ligase Mfr1
Primary source
PomBase:SPBC1198.12
Locus tag
SPOM_SPBC1198.12
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
fzr1; SPBC660.02
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See mfr1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (194678..195989)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene asparagine--tRNA (Asn) ligase Slm5 Neighboring gene ubiquitin conjugating enzyme Ubc16 Neighboring gene ncRNA Neighboring gene RNA polymerase I transcription termination factor/ RNA polymerase II transcription factor Reb1 Neighboring gene transcription factor TFIIF complex beta subunit Tfg2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables anaphase-promoting complex binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables anaphase-promoting complex binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables ubiquitin ligase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ubiquitin ligase activator activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
part_of anaphase-promoting complex IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    194678..195989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020987.1NP_595081.1  ubiquitin ligase Mfr1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595081.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94423
    Conserved Domains (3) summary
    COG2319
    Location:134414
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:169206
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:135407
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...