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cfh4 chitin synthase regulatory factor [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540265, updated on 18-Sep-2024

Summary

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Official Symbol
cfh4
Official Full Name
chitin synthase regulatory factor
Primary source
PomBase:SPBC3E7.12c
Locus tag
SPOM_SPBC3E7.12C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See cfh4 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2682000..2683804, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene DNAJ domain-containing protein type Caj1/Djp1 Neighboring gene methionine aminopeptidase Fma1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SYF2 family splicing factor syf2 Neighboring gene sphingosine N-acyltransferase Lac1 Neighboring gene Sm snRNP core protein Smf1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables enzyme activator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in chitin biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in fungal-type cell wall organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
chitin synthase regulatory factor
NP_596099.1
  • SEL1/TPR repeat protein, chitin synthase regulatory factor Cfh4/ predicted human COA7 ortholog

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2682000..2683804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022015.3 → NP_596099.1  chitin synthase regulatory factor [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596099.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59732
    Conserved Domains (3) summary
    COG0790
    Location:262 → 426
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:311 → 340
    SLR; SLR repeat [structural motif]
    pfam08238
    Location:365 → 402
    Sel1; Sel1 repeat
Nucleotide Protein
Heading Accession and Version

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