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pth1 peptidyl-tRNA hydrolase Pth1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540340, updated on 18-Sep-2024

Summary

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Official Symbol
pth1
Official Full Name
peptidyl-tRNA hydrolase Pth1
Primary source
PomBase:SPBC2D10.15c
Locus tag
SPOM_SPBC2D10.15C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See pth1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003423.3 (2995103..2996271, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene myosin type V Neighboring gene ncRNA Neighboring gene protein mhf1 Neighboring gene SHREC complex intermodule linker subunit Clr1 Neighboring gene ncRNA Neighboring gene ABC1 kinase family ubiquinone biosynthesis ATPase Coq8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables aminoacyl-tRNA hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial matrix IC
Inferred by Curator
more info
  

General protein information

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Preferred Names
peptidyl-tRNA hydrolase Pth1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2995103..2996271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022154.4 → NP_596234.2  peptidyl-tRNA hydrolase Pth1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596234.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74806
    Conserved Domains (1) summary
    COG0193
    Location:29 → 200
    Pth; Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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