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atp7 F0-ATPase subunit D [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540446, updated on 18-Sep-2024

Summary

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Official Symbol
atp7
Official Full Name
F0-ATPase subunit D
Primary source
PomBase:SPBC29A10.13
Locus tag
SPOM_SPBC29A10.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See atp7 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2567572..2568343)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene guanyl-nucleotide exchange factor Muk1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene oxidative stress transcription coactivator/ribosome recycling protein Oxs1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene meiotic cohesin complex kleisin subunit Rec8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Defining the Functional Interactome of Spliceosome-Associated G-Patch Protein Gpl1 in the Fission Yeast Schizosaccharomyces pombe. Selicky T, et al. Int J Mol Sci, 2022 Oct 24. PMID 36361590, Free PMC Article
  2. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to proton-transporting ATP synthase activity, rotational mechanism IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural molecule activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in proton motive force-driven mitochondrial ATP synthesis ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in matrix side of mitochondrial inner membrane IC
Inferred by Curator
more info
  
is_active_in mitochondrion HDA PubMed 
part_of proton-transporting ATP synthase, stator stalk ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
F0-ATPase subunit D

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2567572..2568343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021969.3 → NP_596058.1  F0-ATPase subunit D [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596058.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94390
    Conserved Domains (1) summary
    pfam05873
    Location:12 → 147
    Mt_ATP-synt_D; ATP synthase D chain, mitochondrial (ATP5H)
Nucleotide Protein
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