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ely5 nuclear pore protein Ely5 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540543, updated on 18-Sep-2024

Summary

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Official Symbol
ely5
Official Full Name
nuclear pore protein Ely5
Primary source
PomBase:SPBC29A10.06c
Locus tag
SPOM_SPBC29A10.06C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ely5 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (2547339..2548605, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene exonuclease I Exo1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene nucleoporin, transmembrane ring glycoprotein subunit Pom152 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular basis for Nup37 and ELY5/ELYS recruitment to the nuclear pore complex. Bilokapic S, et al. Proc Natl Acad Sci U S A, 2012 Sep 18. PMID 22955883, Free PMC Article
  2. Characterization of nuclear pore complex components in fission yeast Schizosaccharomyces pombe. Asakawa H, et al. Nucleus, 2014 Mar-Apr. PMID 24637836, Free PMC Article
  3. Virtual breakdown of the nuclear envelope in fission yeast meiosis. Asakawa H, et al. Curr Biol, 2010 Nov 9. PMID 20970342
  4. The fission yeast nucleoporin Alm1 is required for proteasomal degradation of kinetochore components. Salas-Pino S, et al. J Cell Biol, 2017 Nov 6. PMID 28974540, Free PMC Article
  5. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear pore complex assembly ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
part_of nuclear pore IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
nuclear pore protein Ely5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2547339..2548605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021962.3 → NP_596051.2  nuclear pore protein Ely5 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596051.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94384
    Conserved Domains (1) summary
    pfam13934
    Location:44 → 251
    ELYS; Nuclear pore complex assembly
Nucleotide Protein
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