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ctr6 Cu transporter Ctr6 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540641, updated on 18-Sep-2024

Summary

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Official Symbol
ctr6
Official Full Name
Cu transporter Ctr6
Primary source
PomBase:SPBC23G7.16
Locus tag
SPOM_SPBC23G7.16
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ctr6 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003423.3 (2100115..2101253)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene putative MPP complex alpha subunit Mas2 Neighboring gene ncRNA Neighboring gene mitochondrial translation initiation factor Neighboring gene ncRNA Neighboring gene SEL1/TPR repeat protein, protein kinase inhibitor Nif1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global transcriptional responses of fission and budding yeast to changes in copper and iron levels: a comparative study. Rustici G, et al. Genome Biol, 2007. PMID 17477863, Free PMC Article
  2. Cell-surface copper transporters and superoxide dismutase 1 are essential for outgrowth during fungal spore germination. Plante S, et al. J Biol Chem, 2017 Jul 14. PMID 28572514, Free PMC Article
  3. Ctr6, a vacuolar membrane copper transporter in Schizosaccharomyces pombe. Bellemare DR, et al. J Biol Chem, 2002 Nov 29. PMID 12244050
  4. Characterization of Schizosaccharomyces pombe copper transporter proteins in meiotic and sporulating cells. Plante S, et al. J Biol Chem, 2014 Apr 4. PMID 24569997, Free PMC Article
  5. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Ctr4 and Ctr5 proteins co-localize at the plasma membrane shortly after meiotic induction, whereas Ctr6 is located on the membrane of vacuoles.
    Title: Characterization of Schizosaccharomyces pombe copper transporter proteins in meiotic and sporulating cells.
  2. Novel regulatory targets were identified in Schizosaccharomyces pombe for Cuf1p (pex7 and SPAC3G6.05) and Fep1p (srx1, sib1, sib2, rds1, isu1, SPBC27B12.03c, SPAC1F8.02c, and SPBC947.05c).
    Title: Global transcriptional responses of fission and budding yeast to changes in copper and iron levels: a comparative study.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables copper ion transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in copper ion export from vacuole EXP
Inferred from Experiment
more info
 PubMed 
Component Evidence Code Pubs
is_active_in fungal-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in prospore membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Cu transporter Ctr6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2100115..2101253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021766.3 → NP_595861.1  Cu transporter Ctr6 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595861.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9USV7
    Conserved Domains (1) summary
    pfam04145
    Location:14 → 133
    Ctr; Ctr copper transporter family
Nucleotide Protein
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