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rvb2 chaperone, AAA family ATPase Rvb2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541077, updated on 18-Sep-2024

Summary

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Official Symbol
rvb2
Official Full Name
chaperone, AAA family ATPase Rvb2
Primary source
PomBase:SPBC83.08
Locus tag
SPOM_SPBC83.08
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rvb2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (1523992..1525726)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene RNA-binding protein Yme2 Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein bL36m Neighboring gene Lid2 complex histone demethylase H3-K36 subunit Jmj3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U5 snRNP complex subunit LIN1 Neighboring gene ncRNA Neighboring gene protein Emc7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Activity of a C-terminal plant homeodomain (PHD) of Msc1 is essential for function. Qiu X, et al. J Biol Chem, 2010 Nov 19. PMID 20858896, Free PMC Article
  2. CK2 phospho-independent assembly of the Tel2-associated stress-signaling complexes in Schizosaccharomyces pombe. Inoue H, et al. Genes Cells, 2017 Jan. PMID 27935167
  3. High-throughput knockout screen in Schizosaccharomyces pombe identifies a novel gene required for efficient homolog disjunction during meiosis I. Rumpf C, et al. Cell Cycle, 2010 May. PMID 20404563, Free PMC Article
  4. Histone variant H2A.Z regulates centromere silencing and chromosome segregation in fission yeast. Hou H, et al. J Biol Chem, 2010 Jan 15. PMID 19910462, Free PMC Article
  5. The Hsp90 cochaperone TTT promotes cotranslational maturation of PIKKs prior to complex assembly. Toullec D, et al. Cell Rep, 2021 Oct 19. PMID 34686329

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables ATP-dependent chromatin remodeler activity NAS
Non-traceable Author Statement
more info
  
enables DNA helicase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in box C/D snoRNP assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in chromatin remodeling IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of Ino80 complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of Ino80 complex IPI
Inferred from Physical Interaction
more info
 PubMed 
part_of NuA4 histone acetyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of R2TP complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of Swr1 complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of Swr1 complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
chaperone, AAA family ATPase Rvb2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1523992..1525726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021534.3 → NP_595640.1  chaperone, AAA family ATPase Rvb2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595640.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94692
    Conserved Domains (2) summary
    COG1224
    Location:10 → 445
    TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]
    cl21455
    Location:68 → 118
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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