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gta1 glutamyl-tRNA amidotransferase alpha subunit [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541102, updated on 18-Sep-2024

Summary

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Official Symbol
gta1
Official Full Name
glutamyl-tRNA amidotransferase alpha subunit
Primary source
PomBase:SPBC646.03
Locus tag
SPOM_SPBC646.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
her2
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Genomic context

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See gta1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (926784..928797)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene TORC1 serine/threonine protein kinase Tor2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Cwf11 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mRNA cleavage and polyadenylation specificity factor poly(A) polymerase Pla1 Neighboring gene squalene synthase Erg9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene. Lang BF, et al. J Mol Biol, 1985 Aug 5. PMID 4046021

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in glutaminyl-tRNAGln biosynthesis via transamidation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrial translation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
part_of glutamyl-tRNA(Gln) amidotransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrial matrix IC
Inferred by Curator
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
glutamyl-tRNA amidotransferase alpha subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    926784..928797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021269.3 → NP_595361.1  glutamyl-tRNA amidotransferase alpha subunit [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595361.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94509
    Conserved Domains (1) summary
    cl18951
    Location:12 → 470
    Amidase; Amidase
Nucleotide Protein
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