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set6 histone lysine methyltransferase Set6 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541370, updated on 18-Sep-2024

Summary

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Official Symbol
set6
Official Full Name
histone lysine methyltransferase Set6
Primary source
PomBase:SPBP8B7.07c
Locus tag
SPOM_SPBP8B7.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See set6 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (3643793..3645539, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene putative carbonic anhydrase Neighboring gene ribosomal protein P2 Neighboring gene ncRNA Neighboring gene leucine carboxyl methyltransferase Ppm1 Neighboring gene karyopherin exportin-T Los1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Methylation of histone H4 lysine 20 controls recruitment of Crb2 to sites of DNA damage. Sanders SL, et al. Cell, 2004 Nov 24. PMID 15550243
  2. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables histone methyltransferase activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in chromatin IC
Inferred by Curator
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
histone lysine methyltransferase Set6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3643793..3645539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022435.3 → NP_596514.1  histone lysine methyltransferase Set6 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596514.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94256
    Conserved Domains (3) summary
    COG2940
    Location:5 → 483
    SET; SET domain-containing protein (function unknown) [General function prediction only]
    pfam00856
    Location:142 → 227
    SET; SET domain
    pfam01753
    Location:49 → 87
    zf-MYND; MYND finger
Nucleotide Protein
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