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dal2 allantoicase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541441, updated on 18-Sep-2024

Summary

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Official Symbol
dal2
Official Full Name
allantoicase
Primary source
PomBase:SPAC1F7.09c
Locus tag
SPOM_SPAC1F7.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ala1
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Genomic context

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See dal2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4241812..4243393, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene ncRNA Neighboring gene hydantoin racemase family protein Neighboring gene transcription factor Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic studies of purine breakdown in the fission yeast Schizosaccharomyces pombe. Kinghorn JR, et al. Curr Genet, 1984 Feb. PMID 24177583
  2. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
  3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables allantoicase activity EXP
Inferred from Experiment
more info
 PubMed 
enables allantoicase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in allantoin catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in urea cycle IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
allantoicase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4241812..4243393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019924.3 → NP_594495.1  allantoicase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594495.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09913
    Conserved Domains (2) summary
    COG4266
    Location:1 → 338
    Alc; Allantoicase [Nucleotide transport and metabolism]
    pfam03561
    Location:31 → 178
    Allantoicase; Allantoicase repeat
Nucleotide Protein
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