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mmd1 deoxyhypusine hydroxylase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541465, updated on 18-Sep-2024

Summary

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Official Symbol
mmd1
Official Full Name
deoxyhypusine hydroxylase
Primary source
PomBase:SPAC30C2.02
Locus tag
SPOM_SPAC30C2.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See mmd1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4635475..4636898)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene dynein heavy chain, minus-end directed microtubule motor Dhc1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene methionyl and glutamyl-tRNA synthetase cofactor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mmd1p, a novel, conserved protein essential for normal mitochondrial morphology and distribution in the fission yeast Schizosaccharomyces pombe. Weir BA, et al. Mol Biol Cell, 2004 Apr. PMID 14767070, Free PMC Article
  2. Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Dixon SJ, et al. Proc Natl Acad Sci U S A, 2008 Oct 28. PMID 18931302, Free PMC Article
  3. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  4. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables deoxyhypusine monooxygenase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in regulation of cytoplasmic translation IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
deoxyhypusine hydroxylase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4635475..4636898
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020083.3 → NP_594654.1  deoxyhypusine hydroxylase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594654.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P6K9
    Conserved Domains (3) summary
    smart00567
    Location:256 → 285
    EZ_HEAT; E-Z type HEAT repeats
    COG1413
    Location:6 → 311
    HEAT; HEAT repeat [General function prediction only]
    sd00044
    Location:210 → 238
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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