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iba57 iron-sulfur cluster biogenesis IBA57-like protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541968, updated on 18-Sep-2024

Summary

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Official Symbol
iba57
Official Full Name
iron-sulfur cluster biogenesis IBA57-like protein
Primary source
PomBase:SPAC21E11.07
Locus tag
SPOM_SPAC21E11.07
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPAC2C4.01
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Genomic context

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See iba57 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (4260006..4261207)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene translation initiation factor eIF2B delta subunit tif224 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene serine palmitoyltransferase Lcb2 Neighboring gene ncRNA Neighboring gene Sm snRNP core protein Smd2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Formation of [4Fe-4S] clusters in the mitochondrial iron-sulfur cluster assembly machinery. Brancaccio D, et al. J Am Chem Soc, 2014 Nov 19. PMID 25347204
  2. Biogenesis of Iron-Sulfur Clusters and Their Role in DNA Metabolism. Shi R, et al. Front Cell Dev Biol, 2021. PMID 34660592, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in [4Fe-4S] cluster assembly ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in iron-sulfur cluster assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of mitochondrial [4Fe-4S] assembly complex TAS
Traceable Author Statement
more info
 PubMed 
is_active_in mitochondrial matrix IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
iron-sulfur cluster biogenesis IBA57-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4260006..4261207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019933.3 → NP_594504.1  iron-sulfur cluster biogenesis IBA57-like protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594504.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09929
    Conserved Domains (4) summary
    COG0354
    Location:8 → 324
    YgfZ; Folate-binding Fe-S cluster repair protein YgfZ, possible role in tRNA modification [Posttranslational modification, protein turnover, chaperones]
    TIGR03317
    Location:176 → 243
    ygfZ_signature; folate-binding protein YgfZ
    pfam08669
    Location:217 → 298
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain
    cl01893
    Location:32 → 75
    GCV_T; Aminomethyltransferase folate-binding domain
Nucleotide Protein
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