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ntr2 spliceosome complex disassembly protein Ntr2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542263, updated on 18-Sep-2024

Summary

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Official Symbol
ntr2
Official Full Name
spliceosome complex disassembly protein Ntr2
Primary source
PomBase:SPAC17A2.08c
Locus tag
SPOM_SPAC17A2.08C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ntr2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003424.3 (3567982..3569545, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein Vps8 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RNA-binding protein Csx1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of Nrl1 Domains Responsible for Interactions with RNA-Processing Factors and Regulation of Nrl1 Function by Phosphorylation. Mikolaskova B, et al. Int J Mol Sci, 2021 Jun 29. PMID 34209806, Free PMC Article
  2. The spliceosome-associated protein Nrl1 suppresses homologous recombination-dependent R-loop formation in fission yeast. Aronica L, et al. Nucleic Acids Res, 2016 Feb 29. PMID 26682798, Free PMC Article
  3. Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance. Lee NN, et al. Cell, 2013 Nov 21. PMID 24210919, Free PMC Article
  4. Identification of proteins associated with splicing factors Ntr1, Ntr2, Brr2 and Gpl1 in the fission yeast Schizosaccharomyces pombe. Cipakova I, et al. Cell Cycle, 2019 Jul. PMID 31219728, Free PMC Article
  5. Systematic localization study on novel proteins encoded by meiotically up-regulated ORFs in fission yeast. Ikebe C, et al. Biosci Biotechnol Biochem, 2011. PMID 22146723

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in spliceosomal complex disassembly ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of U2-type post-mRNA release spliceosomal complex ISO
Inferred from Sequence Orthology
more info
  
is_active_in cytoplasm HDA PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
spliceosome complex disassembly protein Ntr2
NP_594242.2
  • spliceosome complex disassembly protein Ntr2, human GCFC2 ortholog

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3567982..3569545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019665.3 → NP_594242.2  spliceosome complex disassembly protein Ntr2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594242.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13758
    Conserved Domains (1) summary
    pfam15458
    Location:101 → 328
    NTR2; Nineteen complex-related protein 2
Nucleotide Protein
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