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rpc19 DNA-directed RNA polymerase I and III subunit Rpc19 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542799, updated on 18-Sep-2024

Summary

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Official Symbol
rpc19
Official Full Name
DNA-directed RNA polymerase I and III subunit Rpc19
Primary source
PomBase:SPAC1687.01
Locus tag
SPOM_SPAC1687.01
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
rpa17; SPAPYUL23.01
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Genomic context

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See rpc19 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003424.3 (903025..903861)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene fasciclin domain protein Fsc1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CAAX prenyl protease Neighboring gene DNA replication factor C complex subunit Rfc4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. [Molecular cloning and characteristics of rpc19+ and rpc40+ Schizosaccharomyces pombe genes, coding for common subunits of nuclear RNA polymerase I and III]. Shpakovskiĭ GV, et al. Bioorg Khim, 1998 Dec. PMID 10079952
  2. Isolation and characterization of the fission yeast gene rpa42+, which encodes a subunit shared by RNA polymerases I and III. Imazawa Y, et al. Mol Gen Genet, 1999 Dec. PMID 10628857
  3. The fission yeast rpa17+ gene encodes a functional homolog of AC19, a subunit of RNA polymerases I and III of Saccharomyces cerevisiae. Imai K, et al. Mol Gen Genet, 1999 Mar. PMID 10102372
  4. Conserved strategies of RNA polymerase I hibernation and activation. Heiss FB, et al. Nat Commun, 2021 Feb 3. PMID 33536435, Free PMC Article
  5. RNA processing factors Swd2.2 and Sen1 antagonize RNA Pol III-dependent transcription and the localization of condensin at Pol III genes. Legros P, et al. PLoS Genet, 2014 Nov. PMID 25392932, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
contributes_to DNA-directed 5'-3' RNA polymerase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
contributes_to RNA polymerase I activity IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to RNA polymerase III activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in transcription by RNA polymerase I IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in transcription by RNA polymerase III IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription by RNA polymerase III IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in transcription elongation by RNA polymerase I EXP
Inferred from Experiment
more info
 PubMed 
involved_in transcription elongation by RNA polymerase I IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of RNA polymerase I complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of RNA polymerase I complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of RNA polymerase I complex IGI
Inferred from Genetic Interaction
more info
 PubMed 
part_of RNA polymerase III complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of RNA polymerase III complex IGI
Inferred from Genetic Interaction
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase I and III subunit Rpc19

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    903025..903861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018515.3 → NP_593118.2  DNA-directed RNA polymerase I and III subunit Rpc19 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593118.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09177, Q9UUF9
    Conserved Domains (1) summary
    cd07029
    Location:25 → 109
    RNAP_I_III_AC19; AC19 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III
Nucleotide Protein
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